Did you use the right driver settings for the new board? If you just got the board, it probably has DRV8825-based stepper drivers, which double the resolution of the previous drivers, but need a different steps/mm setting because of this.
Try sending the following code before trying to jog the axes. If that fixes it, you'll know that that's the problem:
M92 X111.98 Y111.98 Z6400 E630
Note: the extruder driver(s) should be configured for 1/8 step by removing the MS3 jumper.